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Uses OpenAI API to determine if a research idea is reasonable and novel for the MPOG database. Not affiliated with MPOG in any way.

A boilerplate for reproducible computational biology projects.

Home of the XSEDE Compatible Basic Cluster

Download cov2 (WuHan1 strain) fasta and gff3 from NCBI, and index with BWA, STAR, etc.

Two sample lists

samples to be processed from raw, internally additional samples already pre-processed from an external source