Explore projects

PE Fastq QC, then de novo assembly with Spades. Intended for viral and bacterial genomics

Ray-trace a PyMol session on cheaha

In preparation for the data movement, to install Parsync and test on our dev platform.

A yml and a set of instructions to build a functioning horovod environment for distributed learning using keras and tensorflow (and torch on Cheaha

Data and Jupyter notebook for analyzing Nanostring data

A Batch Connect app designed for OSC OnDemand implementation that launches MATLAB within an Owens batch job

This project is to note how we can setup a test cluster for OOD development

This tutorial allows user to run parallelism using bash scripts and array jobs. Also it contains parallel scripts for matlab and R

This is an source controlled version of Jon Marstrander's directional divergence matlab code and other useful matlab utilities for managing AFNI data.

NIH AFNI's historical matlab code for handling MRI volumes